PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0019s0168.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 271aa    MW: 30746.7 Da    PI: 8.0698
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0019s0168.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.99.1e-19108195196
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          f+k +++s+v+ + +l lp +f+++h  k  e+ ++tlede+g++   k+    ++ +  l++GW++F+ +++L +gD +vF+l++ ++f
  Kalax.0019s0168.1.p 108 FVKPMSQSHVTGRFWLGLPQRFCKAHLPK--EDEMITLEDEDGNESPSKY--LANRTG--LSGGWRGFALDHELVDGDALVFQLIRPTKF 191
                          89************************533..4569***************..555444..*************************97777 PP

                          ..EEEE CS
                   B3  91 elvvkv 96 
                            +v  
  Kalax.0019s0168.1.p 192 --KVYT 195
                          ..4444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019364.12E-24102199IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.4E-21104197IPR015300DNA-binding pseudobarrel domain
CDDcd100174.15E-27106194No hitNo description
PfamPF023623.3E-17108195IPR003340B3 DNA binding domain
PROSITE profilePS5086312.111108199IPR003340B3 DNA binding domain
SMARTSM010195.7E-24108199IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MVASATSNYE KLRRQRLKEN KKRMEELNLL NLSKSLYAAT PKPSPAKHRK PKSARKEVDL  60
FAVRRSCRTA GKPRPDYKEV YASHESRLSA VKRAEQLESE LGFEYPCFVK PMSQSHVTGR  120
FWLGLPQRFC KAHLPKEDEM ITLEDEDGNE SPSKYLANRT GLSGGWRGFA LDHELVDGDA  180
LVFQLIRPTK FKVYTVRVNE HENGDESNED VADADGDDDV VLLKPAPIVK PRKVAKPSPG  240
TRRSRRKKSI YEDEDEDADD DVFLVEVLET *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11222RRQRLKENKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007042396.12e-89AP2/B3-like transcriptional factor family protein, putative
SwissprotQ1G3M36e-73Y3918_ARATH; B3 domain-containing protein At3g19184
TrEMBLA0A061E0U42e-89A0A061E0U4_THECC; AP2/B3-like transcriptional factor family protein, putative
STRINGVIT_03s0063g00620.t011e-84(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.16e-66B3 family protein